BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C01SP1|AL429353
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1496 0.0
>3x_Contig1461
Length = 5478
Score = 1496 bits (752), Expect = 0.0
Identities = 875/910 (96%), Gaps = 7/910 (0%)
Strand = Plus / Plus
Query: 13 atgctgtcaagtccckcatcaactgtcgcagatattttatcatgattagaaatgcaagth 72
||||| |||| |||| |||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 2076 atgctctcaactcccgcatcaactttcgcatatattttatcattattataaatgcaagta 2135
Query: 73 aggwaacaagtttccatactcgcgtcggaagcaacaattcaacagtttttacactatcaa 132
||| ||||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 2136 aggaaacaattttccatactcgcttcaaaagcaacaattcaacagtttttacactatcaa 2195
Query: 133 atcatcacaacccctccatgccatagcactctttgagtttcctctaaccgacttccactg 192
||||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||
Sbjct: 2196 atcatcacaacccctccattccatagcactctttaattttcctctaaccaacttccactg 2255
Query: 193 aacactgctccgatgtttcgcagaaacagaa-cgttcaatatcatc-ggccaaagagga- 249
||||||||||| || ||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2256 aacactgctccaatttttcgcaaaaacagaaacgttcaatatcatccggccaaagaggaa 2315
Query: 250 ggttacactcacagaatcacagacaaccaaagtcgcccggctattctgttaggcattccc 309
||||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||
Sbjct: 2316 ggttacactcacaaaatcacaaacaaccaaagtcgccccgctattctgtaaggcattccc 2375
Query: 310 ccaaatatggtttctttggtttggdttgccattggctagttatccaccaaatcctccact 369
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 2376 ccaaatatggtttctttggtttggattgccattggctagtaatccaccaaatcctccact 2435
Query: 370 gctcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagcatct 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 gctcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagcatct 2495
Query: 430 ttcgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatctgacga 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2496 ttcgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatctgacga 2555
Query: 490 tcacctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgactaca 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2556 tcacctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgactaca 2615
Query: 550 tccaaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgc 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2616 tccaaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgc 2675
Query: 610 atgaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctcacg- 668
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2676 atgaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctcacgt 2735
Query: 669 ttctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttt 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2736 ttctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttt 2795
Query: 729 tcagtattttttcaaatggtaaaattcgcacttttagctttttttctt-cccttcttttt 787
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2796 tcagtattttttcaaatggtaaaattcgcacttttagctttttttcttccccttcttttt 2855
Query: 788 catcaacgattctcccctttatatacaaatctcgattttcgtttttgtgtttcccttttt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856 catcaacgattctcccctttatatacaaatctcgattttcgtttttgtgtttcccttttt 2915
Query: 848 attttttcactcctgttaagrgggataatcccactggttgagaag-aaataaaaaaaa-a 905
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 2916 attttttcactcctgttaaggaggataatcccactggttgagaagaaaataaaaaaaaca 2975
Query: 906 aataaaaaaa 915
||||||||||
Sbjct: 2976 aataaaaaaa 2985
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,801
Number of Sequences: 1807
Number of extensions: 13801
Number of successful extensions: 1594
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)